| Program name | Description |
| abiview |
Display the trace in an ABI sequencer file
|
| cirdna |
Draws circular maps of DNA constructs
|
| lindna |
Draws linear maps of DNA constructs
|
| pepnet |
Draw a helical net for a protein sequence
|
| pepwheel |
Draw a helical wheel diagram for a protein sequence
|
| prettyplot |
Draw a sequence alignment with pretty formatting
|
| prettyseq |
Write a nucleotide sequence and its translation to file
|
| remap |
Display restriction enzyme binding sites in a nucleotide sequence
|
| seealso |
Finds programs with similar function to a specified program
|
| showalign |
Display a multiple sequence alignment in pretty format
|
| showdb |
Displays information on configured databases
|
| showfeat |
Display features of a sequence in pretty format
|
| showpep |
Displays protein sequences with features in pretty format
|
| showseq |
Displays sequences with features in pretty format
|
| sixpack |
Display a DNA sequence with 6-frame translation and ORFs
|
| textsearch |
Search the textual description of sequence(s)
|